Q. The softwares for dot plot analysis perform several tasks. Which one of them is not performed by them?

View solution

Q. For palindromic sequences, what is the structure of the dot plot?

View solution

Q. For significantly aligning sequences what is the resulting structure on the plot?

View solution

Q. When was the dot plot method, first described?

View solution

Q. Who were the inventors of dot plot method?

View solution

Q. Which of the following is true for EMBOSS Dottup?

View solution

Q. Isolated dots that are not on the diagonal represent exact matches.

View solution

Q. Vertical frame shifts show ______ while the horizontal ones show _______

View solution

Q. Dot plot of repeating elements would be small crosses on plot.

View solution

Q. Use of the dynamic programming method requires a scoring system for the comparison of symbol pairs, and a scheme for GAP penalties.

View solution

Q. After the derivation, the outputs of the dynamic programming are the ratios are called even scores.

View solution

Q. The matrices PAM250 and BLOSUM62 contain _______

View solution

Q. The higher is the score in the alignment _________

View solution

Q. Gaps are added to the alignment because it ______

View solution

Q. Which of the following is not a description of dynamic programming algorithm?

View solution

Q. Which of the following is not a site on internet for alignment of sequence pairs?

View solution

Q. Dayhoff PAM matrices, are based on an evolutionary model of protein change, whereas, BLOSUM matrices, are designed to identify members of the same family.

View solution

Q. A feature of the dynamic programming algorithm is that the alignments obtained depend on the choice of a scoring system for comparing character pairs and penalty scores for gaps.

View solution

Q. Which of the following is untrue regarding dynamic programming algorithm?

View solution

Q. In scoring matrices, for convenience, odds scores are converted to log odds scores.

View solution