Q. In BPROM, once the operons are assigned, the program is able to predict putative promoter sequences.

View solution

Q. Which of the following is incorrect regarding FindTerm?

View solution

Q. Which of the following is incorrect regarding the Prediction for Eukaryotes?

View solution

Q. To increase the specificity of prediction, a unique feature of eukaryotic promoter is employed, which is the presence of CpG islands.

View solution

Q. The eukaryotic transcription initiation is less dependent on transcription factors.

View solution

Q. CpGProD is a web-based program that predicts promoters containing a high density of CpG islands _______

View solution

Q. Which of the following is incorrect regarding Eponine?

View solution

Q. Which of the following is incorrect regarding Cluster-Buster?

View solution

Q. Which of the following is incorrect regarding First EF?

View solution

Q. McPromoter, a web-based program, uses a neural network to make promoter predictions.

View solution

Q. The input for the neural network includes parameters for sequence physical properties, such as ______

View solution

Q. TSSW is a web program that distinguishes promoter sequences from non-promoter sequences based on a combination of unique content information such as hexamer/trimer frequencies and signal information such the TATA box in the promoter region.

View solution

Q. Which of the following is incorrect regarding CONPRO?

View solution

Q. In CONPRO, for each program, the highest score prediction is taken as the promoter in the region.

View solution

Q. Which of the following is incorrect regarding Phylogenetic Footprinting–Based Method?

View solution

Q. A caveat of phylogenetic footprinting is to extract noncoding sequences Upstream of corresponding genes and focus the comparison to this region only, which helps to prevent false positives.

View solution

Q. Which of the following is untrue about ConSite?

View solution

Q. rVISTA uses two orthologous sequences as input and first identifies all putative regulatory motifs based on TRANSFAC matches.

View solution

Q. Which of the following is untrue about Bayes Aligner?

View solution

Q. Which of the following is untrue about FootPrinter?

View solution