Q. Which of the following is incorrect about protein structure comparison?

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Q. The intermolecular approach is normally applied to relatively _____ structures.

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Q. Which of the following is incorrect about intermolecular approach?

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Q. The root mean square deviation (RMSD), without the size dependency correction is?

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Q. The root mean square deviation (RMSD), with the size dependency correction is?

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Q. The intramolecular approach does not depend on sequence similarity between the proteins to be compared.

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Q. Which of the following is incorrect about the intramolecular approach?

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Q. Which of the following is incorrect about Multiple Structure Alignment?

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Q. Which of the following is incorrect about SSAP?

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Q. VAST is a web server that performs alignment using intramolecular approaches only.

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Q. The classification results from both systems, SCOP and CATH are quite dissimilar.

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Q. The first step in structure classification is to remove redundancy from databases.

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Q. The second step in structure classification is to separate structurally distinct domains within a structure.

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Q. The last step in structure classification involves grouping proteins/domains of similar structures.

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Q. Which of the following is untrue about SCOP?

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Q. Members within the ____ fold ______ have evolutionary relationships.

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Q. In CATH, Structural domain separation is carried by ___________

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Q. Which of the following is untrue about SCOP and CATH?

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Q. SCOP is _______ based on manual comparison of structures by human experts with no quantitative criteria to group proteins.

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Q. CATH is a combination of manual curation and automated procedure, which makes the process less subjective.

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