Question

Which of the following is correct regarding the method for prokaryotic operon prediction?

a.

It relies on two kinds of information: gene orientation and intergenic distances of a pair of genes of interest and conserved linkage of the genes based on comparative genomic analysis

b.

It relies only on the gene orientation and intergenic distances of a pair of genes of interest

c.

It relies only on the conserved linkage of the genes based on comparative genomic analysis

d.

The prediction cannot be done manually using the rules

Posted under Bioinformatics

Answer: (a).It relies on two kinds of information: gene orientation and intergenic distances of a pair of genes of interest and conserved linkage of the genes based on comparative genomic analysis

Interact with the Community - Share Your Thoughts

Uncertain About the Answer? Seek Clarification Here.

Understand the Explanation? Include it Here.

Q. Which of the following is correct regarding the method for prokaryotic operon prediction?

Similar Questions

Explore Relevant Multiple Choice Questions (MCQs)

Q. Which of the following is incorrect regarding BPROM?

Q. In BPROM, once the operons are assigned, the program is able to predict putative promoter sequences.

Q. Which of the following is incorrect regarding FindTerm?

Q. Which of the following is incorrect regarding the Prediction for Eukaryotes?

Q. To increase the specificity of prediction, a unique feature of eukaryotic promoter is employed, which is the presence of CpG islands.

Q. The eukaryotic transcription initiation is less dependent on transcription factors.

Q. CpGProD is a web-based program that predicts promoters containing a high density of CpG islands _______

Q. Which of the following is incorrect regarding Eponine?

Q. Which of the following is incorrect regarding Cluster-Buster?

Q. Which of the following is incorrect regarding First EF?

Q. McPromoter, a web-based program, uses a neural network to make promoter predictions.

Q. The input for the neural network includes parameters for sequence physical properties, such as ______

Q. TSSW is a web program that distinguishes promoter sequences from non-promoter sequences based on a combination of unique content information such as hexamer/trimer frequencies and signal information such the TATA box in the promoter region.

Q. Which of the following is incorrect regarding CONPRO?

Q. In CONPRO, for each program, the highest score prediction is taken as the promoter in the region.

Q. Which of the following is incorrect regarding Phylogenetic Footprinting–Based Method?

Q. A caveat of phylogenetic footprinting is to extract noncoding sequences Upstream of corresponding genes and focus the comparison to this region only, which helps to prevent false positives.

Q. Which of the following is untrue about ConSite?

Q. rVISTA uses two orthologous sequences as input and first identifies all putative regulatory motifs based on TRANSFAC matches.

Q. Which of the following is untrue about Bayes Aligner?

Recommended Subjects

Are you eager to expand your knowledge beyond Bioinformatics? We've handpicked a range of related categories that you might find intriguing.

Click on the categories below to discover a wealth of MCQs and enrich your understanding of various subjects. Happy exploring!